[391] - Genetic dataset for the study Phylogenetic relationships of darkling beetles (Coleoptera: Tenebrionidae) from the Atacama Desert and their classification within world’s Tenebrionidae

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Citation
Ragionieri, L., Bläser, M., Predel, R., Zúñiga-Reinoso, A., 2020. Genetic dataset for the study Phylogenetic relationships of darkling beetles (Coleoptera: Tenebrionidae) from the Atacama Desert and their classification within world’s Tenebrionidae. CRC1211 Database (CRC1211DB). DOI: 10.5880/CRC1211DB.35.
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Identification
Title(s):Main Title: Genetic dataset for the study Phylogenetic relationships of darkling beetles (Coleoptera: Tenebrionidae) from the Atacama Desert and their classification within world’s Tenebrionidae
Description(s):Abstract: The dataset contains the genetic information of the phylogenetic study of darkling beetles (Coleoptera: Tenebrionidae) from the Atacama Desert. We provide five zip files containing: 1) Supplementary Material S3 which including: - Matrix for ML analysis presented in Fig. 2B (amino acids in PHYLIP format). - Partition schemes of IQ-tree matrix for Fig. 2B (Fig_2B_IQtree_best_scheme). - Partition schemes of matrix for Fig. 2B prior to ModelFinder (AA_partitions). 2) Supplementary Material S4 which including: - Matrix for ML analysis presented in Fig. 2A (amino acids in PHYLIP format). - Matrix for BI analysis presented in Fig. 2A, including partitions and evolutionary models for each partition (amino acids in NEXUS format). - Partition schemes of IQ-tree matrix for Fig. 2A (Fig_2A_IQtree_best_scheme). - Partition schemes of matrices for Fig. 2A prior to ModelFinder (AA_partitions). Supplementary Material S5 which including: - Matrix for ML analysis presented in Fig. 3 (amino acids in PHYLIP format). - Matrix for BI analysis presented in Fig. 3, including partitions and evolutionary models for each partition (amino acids in NEXUS format). - Partition schemes of IQ-tree matrix for Fig. 3 (Fig_3_IQtree_best_scheme). - Partition scheme of matrices for Fig. 3 prior to ModelFinder (AA_partitions). Supplementary Material S7: - Matrix including partitions for phylogenetic analyses with 28S, 18S, 16S, and COI genes (alignment in Nexus format) as presented in Fig. 5 and Supplementary Material S9. Supplementary Material S11: - Matrix including partitions (alignment in Nexus format) for phylogenetic analyses of Opatrini presented in Supplementary Material S11.
Responsible Party
Creator(s):Author: Lapo Ragionieri
Author: Marcel Bläser
Author: Reinhard Predel
Author: Alvaro Zúñiga-Reinoso
Publisher:CRC1211 Database (CRC1211DB)
Topic
CRC1211 Topic:Biology
Related Sub-project(s):B2
Subject(s):CRC1211 Keywords: Phylogeny, Evolution, Insects, Arid Zone, Biodiversity
Topic Category:Biota
File Details
File Name:SupplMatTenebs.zip
Data Type:Dataset
File Size:10047 kB (9.812 MB)
Date(s):Date Submitted: 2020-12-21
Mime Type:application/zip
Data Format:ZIP
Language:English
Status:Completed
Constraints
Download Permission:OnlyOwnSubproject
General Access and Use Conditions:According to the CRC1211DB data policy agreement.
Access Limitations:According to the CRC1211DB data policy agreement.
Licence:CRC1211DB Data policy agreement
Geographic
North:-16.24200
East:-65.93506
South:-29.40697
West:-71.60400
Measurement Region:Chile
Measurement Location:--Chile--
Specific Informations - Data
Temporal Extent:2020/12/21 - 2028/06/02
Metadata Details
Metadata Creator:Alvaro Zúñiga
Metadata Created:2020-12-21
Metadata Last Updated:2020-12-21
Subproject:B2
Funding Phase:1
Metadata Language:English
Metadata Version:V43
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