Genetic dataset for the study Phylogenetic relationships of darkling beetles (Coleoptera: Tenebrionidae) from the Atacama Desert and their classification within world’s Tenebrionidae

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Title:Main Title: Genetic dataset for the study Phylogenetic relationships of darkling beetles (Coleoptera: Tenebrionidae) from the Atacama Desert and their classification within world’s Tenebrionidae
Description:Abstract: The dataset contains the genetic information of the phylogenetic study of darkling beetles (Coleoptera: Tenebrionidae) from the Atacama Desert. We provide five zip files containing: 1) Supplementary Material S3 which including: - Matrix for ML analysis presented in Fig. 2B (amino acids in PHYLIP format). - Partition schemes of IQ-tree matrix for Fig. 2B (Fig_2B_IQtree_best_scheme). - Partition schemes of matrix for Fig. 2B prior to ModelFinder (AA_partitions). 2) Supplementary Material S4 which including: - Matrix for ML analysis presented in Fig. 2A (amino acids in PHYLIP format). - Matrix for BI analysis presented in Fig. 2A, including partitions and evolutionary models for each partition (amino acids in NEXUS format). - Partition schemes of IQ-tree matrix for Fig. 2A (Fig_2A_IQtree_best_scheme). - Partition schemes of matrices for Fig. 2A prior to ModelFinder (AA_partitions). Supplementary Material S5 which including: - Matrix for ML analysis presented in Fig. 3 (amino acids in PHYLIP format). - Matrix for BI analysis presented in Fig. 3, including partitions and evolutionary models for each partition (amino acids in NEXUS format). - Partition schemes of IQ-tree matrix for Fig. 3 (Fig_3_IQtree_best_scheme). - Partition scheme of matrices for Fig. 3 prior to ModelFinder (AA_partitions). Supplementary Material S7: - Matrix including partitions for phylogenetic analyses with 28S, 18S, 16S, and COI genes (alignment in Nexus format) as presented in Fig. 5 and Supplementary Material S9. Supplementary Material S11: - Matrix including partitions (alignment in Nexus format) for phylogenetic analyses of Opatrini presented in Supplementary Material S11.
Identifier:10.5880/CRC1211DB.35 (DOI)
Responsible Party
Creators:Lapo Ragionieri (Author), Marcel Bläser (Author), Reinhard Predel (Author), Alvaro Zúñiga-Reinoso (Author)
Publisher:CRC1211 Database (CRC1211DB)
Publication Year:2020
Topic
CRC1211 Topic:Biology
Related Subproject:B2
Subjects:Keywords: Phylogeny, Evolution, Insects, Arid Zone, Biodiversity
Geogr. Information Topic:Biota
File Details
Filename:SupplMatTenebs.zip
Data Type:Dataset - Dataset
File Size:9.8 MB
Date:Submitted: 21.12.2020
Mime Type:application/zip
Data Format:ZIP
Language:English
Status:Completed
Constraints
Download Permission:Only Own Subproject
General Access and Use Conditions:According to the CRC1211DB data policy agreement.
Access Limitations:According to the CRC1211DB data policy agreement.
Licence:[CRC1211DB] Data policy agreement
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Specific Information - Data
Temporal Extent:21.12.2020, 15:24:00 - 02.06.2028, 15:24:00
Subtype:Natural Science Data
Metadata Details
Metadata Creator:Alvaro Zúñiga
Metadata Created:21.12.2020
Metadata Last Updated:21.12.2020
Subproject:B2
Funding Phase:1
Metadata Language:English
Metadata Version:V50
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