Sample locations and GBS output files for analysing the population genomics of Tillandsia landbeckii
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| Title: | Main Title: Sample locations and GBS output files for analysing the population genomics of Tillandsia landbeckii |
| Description: | Abstract: This dataset contains the Ipyrad output file in vcf format from a genotyping-by-sequencing (GBS) analysis of 21 populations of Tillandsia landbeckii (307 individuals) from the Atacama Desert between Caldera and Arica. The variant call format (vcf) file is accompanied by a Tillandsia_stats.txt file as part of the output, listing the Ipyrad assembly details. Further, a Tillandsia_GBS_summary.txt file is included with geographic locations of all populations. Sequence reads for the GBS Illumina runs were deposited in the European Nucleotide Archive under the study accession PRJEB35036. |
| Identifier: | 10.5880/CRC1211DB.27 (DOI) |
Responsible Party
| Creators: | Felix F. Merklinger (Author), Yichen Zheng (Author), Federico Luebert (Author), Doerte Harpke (Author), Tim Böhnert (Author), Alexandra Stoll (Author), Marcus Koch (Author), Frank R Blattner (Author), Thomas Wiehe (Author), Dietmar Quandt (Author) |
| Funding Reference: | Deutsche Forschungsgemeinschaft (DFG): CRC 1211: Earth - Evolution at the Dry Limit |
| Publisher: | CRC1211 Database (CRC1211DB) |
| Publication Year: | 2019 |
Topic
| Subjects: | Keywords: Population Genetics, Ecology of Plants, Evolution, Biodiversity |
| Geogr. Information Topic: | Biota |
File Details
| Filename: | SampleLocations_GBSoutput_Tillandsia.zip |
| Data Type: | Dataset - Dataset |
| Size: | 13 Datasets |
| File Size: | 12.1 MB |
| Date: | Submitted: 23.10.2019 |
| Mime Type: | application/zip |
| Language: | English |
Archive Content
Constraints
| Download Permission: | Free |
| Licence: | [CRC1211DB] Data policy agreement |
Geographic
Metadata Details
| Metadata Creator: | Felix F. Merklinger |
| Metadata Created: | 24.10.2019 |
| Metadata Last Updated: | 24.10.2019 |
| Subproject: | B1 |
| Funding Phase: | 1 |
| Metadata Language: | English |
| Metadata Version: | V50 |
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Dataset Statistics
| Page Visits: | 529 |
| Metadata Downloads: | 0 |
| Dataset Downloads: | 6 |
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Adequate reference when this dataset will be discussed or used in any publication or presentation is mandatory. In this case please contact the dataset creator.
Adequate reference when this dataset will be discussed or used in any publication or presentation is mandatory. In this case please contact the dataset creator.
